Latest revision as of 12:42, 27 October 2011

Team:USTC-Software - 2011.igem.org

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Lachesis

Team

Our team is formed of a group of diligent students coming from various departments of USTC. In the School of Life Sciences, we devoted our perspirations to this project for nearly a year.

Details

Models

Biological reaction networks, even small ones, contain a lot of species and reactions and, thus, are hard to build by hand. Our rule-based modeling approach aims at freeing human from such labor.

Details

Human practice

We conducted a survey, during the National Science Week, to discover USTC students' opinion on Synthetic Biology.

Details

Project

Our project this year is named Lachesis, which consists of the following

1.Automatic generation of biological reaction network simply from biobrick assemblys.
2.Data exchange,Reaction network visualization.
3.Automatic parameter fitting of a mathematical model for a desired behavior, according to experiment data or hand drawn curves using evolution algorithm.
4.Evaluation of the workablility or robustness of a biological reaction network using pca and entropy.

Details

Sponsers

Vistor

Welcome to University of Science and Technology of China !

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+        <h1>Lachesis</h1>
-<!-- end of header_wrapper -->
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+  <div>
-<div id="content_wrapper">
-	<div id="content">
-        <div class="content_section">
+    <div class="content_section">
-             <h2>Lachesis</h2>
+             <div class="intro_box margin_r10">
-             <div class="view_box margin_r10">
+	            <h3>Team</h3>
+                <img src="https://static.igem.org/mediawiki/2011/7/78/USTC_Software_image_02.jpg" alt="product" />
+              <p class="intro">Our team is formed of a group of diligent students coming from various departments of USTC. In the School of Life Sciences, we devoted our perspirations to this project for nearly a year. <div class="button_01">
+<a href="https://2011.igem.org/Team:USTC-Software/team">Details</a> </div> </p> </div>
+             <div class="intro_box margin_r10">
+	            <h3>Models</h3>
+                <img src="https://static.igem.org/mediawiki/2011/c/c8/USTC_Software_image_03.jpg" alt="product" />
+              <p class="intro">Biological reaction networks, even small ones, contain a lot of species and reactions and, thus, are hard to build by hand. Our rule-based modeling approach aims at freeing human from such labor.
+              <div class="button_01">
+<a href="https://2011.igem.org/Team:USTC-Software/documents">Details</a> </div> </p> </div>
-	            <h3>&nbsp;</h3>
+             <div class="intro_box margin_r10">
-                <img src="https://static.igem.org/mediawiki/2011/7/78/USTC_Software_image_02.jpg" alt="view" />
+	            <h3>Human practice</h3>
-              <p class="price">Assembly View</p>
+                 <img src="https://static.igem.org/mediawiki/2011/3/3c/USTC_Software_image_04.jpg" alt="product" />
-            </div>
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-	            <h3>&nbsp;</h3>
-                <img src="https://static.igem.org/mediawiki/2011/c/c8/USTC_Software_image_03.jpg" alt="view" />
-                  <p class="price">Network View<a href="#"></a>
-            </p></div>
-            <div class="view_box ">
-	            <h3>&nbsp;</h3>
-                 <img src="https://static.igem.org/mediawiki/2011/3/3c/USTC_Software_image_04.jpg" alt="view" />
-               <p class="price">Behavior View<a href="#"></a>
+               <p class="intro">We conducted a survey, during the National Science Week, to discover USTC students' opinion on Synthetic
-          </p></div>
+Biology.<div class="button_01"> <a href="https://2011.igem.org/Team:USTC-Software/human practice">Details</a> </div> </p> </div>
              <div class="cleaner"></div>
+    </div>
-            <div class="button_01"><a href="https://2011.igem.org/Team:USTC-Software/project">View All</a></div>
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          <div class="cleaner_h40"></div>
-        <div class="content_section">
+    <div class="content_section">
-         <h2>Project Description</h2>
+         <h2>Project</h2>
-        	<img src="https://static.igem.org/mediawiki/2011/f/fd/USTC_Software_image_05.jpg" alt="image" class="fl_image" />
+   	  <img src="https://static.igem.org/mediawiki/2011/f/fd/USTC_Software_image_05.jpg" alt="image" width="363" class="fl_image" />
-<p><span lang="EN-US" xml:lang="EN-US">USTC 2011 DRY TEAM as a one has worked diligently on designing and implementing a user friendly and interacting-prone software which will get nearer to biology reality and free synthetic biologist from considering unnecessary minutia as well as help both layman and expert draw deep understanding of the mechanism on how the gene circuit run.</span></p>
-<div><span lang="EN-US" xml:lang="EN-US">We offer a visualizing tool which give insight into the dynamics of a biology network. User dominated parameter adjustment process is also provided to assist in getting the required behavior. In order to assess the network&rsquo;s immunology to parameter perturbation, a PCA analysis approach is exploited to depict the structure of a &ldquo;good&rdquo; behaved region.   </span>
+    <p>
-       </div>
+<span lang="EN-US" xml:lang="EN-US">Our project this year is named Lachesis, which consists of the following</span>
-         </div>
+<br/>
+           <div><span lang="EN-US" xml:lang="EN-US">
+.Automatic generation of biological reaction network simply from biobrick assemblys.<br/>
+.Data exchange,Reaction network visualization.<br/>
+.Automatic parameter fitting of a mathematical model for a desired behavior, according to experiment data or hand drawn curves using evolution algorithm.<br/>
+.Evaluation of the workablility or robustness of a biological reaction network using pca and entropy.<br/>
+</p>
+</span>
+</div>
+<p class="em_text"><p class="intro"> <div class="button_01"> <a href="https://2011.igem.org/Team:USTC-Software/project">Details</a> </div> </p> </p>
+    </div>
+<br/>
+ <h2>Sponsers</h2>
+<table width="917" border="0">
+  <tr>
+     <td width="180"><img src="https://static.igem.org/mediawiki/2011/5/5b/USTC_Software_IF_LOGO_2.jpg"  width="180" /></td>
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+          <tr>
+            <td width="227"><img src="https://static.igem.org/mediawiki/2011/1/11/USTC_Software_TAO_LOGO.png"  width="238" height="83"/></td>
+            <td width="234"><img src="https://static.igem.org/mediawiki/2011/d/d3/USTC_Software_sols.png" width="238" height="83"/></td>
+            <td width="249"><img src="https://static.igem.org/mediawiki/2011/e/ef/USTC_Software_ADGE_LOGO.png" width="238" height="83"/></td>
+          </tr>
+          <tr>
+            <td height="86"><img src="https://static.igem.org/mediawiki/2011/1/18/USTC_Software_information.png"  width="238" height="83"/></td>
+            <td><img src="https://static.igem.org/mediawiki/2011/2/25/USTC_Software_chemistry.jpg"  width="238" height="83"/></td>
+            <td><img src="https://static.igem.org/mediawiki/2011/c/cf/USTC_Software_math.jpg"  width="238" height="83"/></td>
+          </tr>
+        </table>
+    </td>
+  </tr>
+</table>
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+ <br/>
+<br/>
+<h2>Vistor</h2>
+  <div id="clustrmaps-widget"></div><script type="text/javascript">var _clustrmaps = {'url' : 'https://2011.igem.org/Team:USTC-Software', 'user' : 930921, 'server' : '4', 'id' : 'clustrmaps-widget', 'version' : 1, 'date' : '2011-10-02', 'lang' : 'zh', 'corners' : 'square' };(function (){ var s = document.createElement('script'); s.type = 'text/javascript'; s.async = true; s.src = 'http://www4.clustrmaps.com/counter/map.js'; var x = document.getElementsByTagName('script')[0]; x.parentNode.insertBefore(s, x);})();</script><noscript><a href="http://www4.clustrmaps.com/user/e30e3469"><img src="http://www4.clustrmaps.com/stats/maps-no_clusters/2011.igem.org-Team-USTC-Software-thumb.jpg" alt="Locations of visitors to this page" /></a></noscript>
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+    <br/> <br/>
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-  <h2>Sponsorship</h2>
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-   <p align="left"> <img src="https://static.igem.org/mediawiki/2011/b/ba/USTC_Software_IF_LOGO.jpg" width="146" height="142"><strong><em>The University of Science and Technology of China Initiative Foundation</em></strong></p>
+   (function() {
-  <p align="left"><img src="https://static.igem.org/mediawiki/2011/1/11/USTC_Software_TAO_LOGO.png" width="364" height="71"><strong><em>School of Life Sciences, USTC</em></strong></p>
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-  <p align="left"><img src="https://static.igem.org/mediawiki/2011/d/d3/USTC_Software_sols.png" width="365" height="63"><strong><em>Teaching Affair Office, USTC</em></strong></p>
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-  <p align="left"> <img src="https://static.igem.org/mediawiki/2011/e/ef/USTC_Software_ADGE_LOGO.png" width="367" height="68"><strong><em>Graduate School, USTC</em></strong></p>
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