Team:USTC-Software

From 2011.igem.org

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<body>
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  <div id="site_title">
 
-
            <h1><img src="https://static.igem.org/mediawiki/2011/b/b8/USTC_Software_iGEM_logo.jpg" alt="iGEM" width="173" height="150" /> </br> </br> USTC-Software </h1>
 
-
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-
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<ul id="nav">
 
-
<li><a class="on" href="https://2011.igem.org/Team:USTC-Software">Home</a></li>
 
-
 
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    <li><a href="https://2011.igem.org/Team:USTC-Software/project">Project</a>
 
-
<ul>
 
-
<li><a href="https://2011.igem.org/Team:USTC-Software/documents">Documents Parser & Models </a></li>
 
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<li><a href="#">Views</a>
 
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                                  <ul>
 
-
                                      <li><a href="https://2011.igem.org/Team:USTC-Software/aview">Assembly View</a></li>
 
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                                      <li><a href="https://2011.igem.org/Team:USTC-Software/bview">Behavior View</a></li>
 
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                                      <li><a href="https://2011.igem.org/Team:USTC-Software/nview">Network View</a></li>                     
 
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                                  </ul>
 
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                                </li>
 
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                                <li><a href="#">Technology & Algorithm</a>
 
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                                  <ul>
 
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                                    <li><a href="https://2011.igem.org/Team:USTC-Software/parameter">Parameter Analysis</a></li>
 
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                                    <li><a href="https://2011.igem.org/Team:USTC-Software/model">MoDeL</a></li>
 
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                                  </ul>
 
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                                </li>
 
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                                <li><a href="https://2011.igem.org/Team:USTC-Software/tutorial">Tutorial & Demo</a></li>
 
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</ul>
 
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</li>
 
-
 
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                <li><a href="https://2011.igem.org/Team:USTC-Software/notebook">Notebook</a></li>
 
-
 
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<li><a href="https://2011.igem.org/Team:USTC-Software/team">Team</a>
 
-
                          <ul>
 
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                            <li><a href="https://2011.igem.org/Team:USTC-Software/members">Members</a></li>
 
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                            <li><a href="https://2011.igem.org/Team:USTC-Software/collaboration">Collaboration</a></li>
 
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                            <li><a href="https://2011.igem.org/Team:USTC-Software/attribution">Attribution & Contributions</a></li>
 
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                            <li><a href="https://2011.igem.org/Team:USTC-Software/acknowledgements">Acknowledgements</a></li>
 
-
                          </ul>
 
-
                </li>
 
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  <li><a href="https://2011.igem.org/Team:USTC-Software/human practice">Human Practice</a>             
 
-
  <ul>
 
-
    <li><a href="https://2011.igem.org/Team:USTC-Software/safety">Safety & Security</a></li>
 
-
    <li><a href="https://2011.igem.org/Team:USTC-Software/meetup">Meetup</a></li>
 
-
  </ul>
 
-
</li> 
 
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<li><a class="last" href="https://2011.igem.org/Team:USTC-Software/download">Download</a></li>
 
-
           
 
-
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-
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     <img src="https://static.igem.org/mediawiki/2011/f/fd/USTC_Software_image_05.jpg" alt="image" width="363" class="fl_image" />
     <img src="https://static.igem.org/mediawiki/2011/f/fd/USTC_Software_image_05.jpg" alt="image" width="363" class="fl_image" />
                      
                      
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     <p><span lang="EN-US" xml:lang="EN-US">Our project of this year is Lachesis, which provide functions including:</span></p>
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            <div><span lang="EN-US" xml:lang="EN-US">
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<span lang="EN-US" xml:lang="EN-US">Our project this year is named Lachesis, which consists of the following</span>
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<P>1.Automatically generating biological reaction network from assembly structure constructed by user.</P>
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<br/>
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<p>2.Fitting a biological reaction network's parameters to experiment data or hand drawn curves.</p>
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<p>3.Evaluating the sensitivity and robustness of a biological reaction network.</p>
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<p>4.Making biological reaction network easy to work with by the methods of visualization.</p>   </span></div>
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1.Automatic generation of biological reaction network simply from biobrick assemblys.<br/>
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2.Data exchange,Reaction network visualization.<br/>
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3.Automatic parameter fitting of a mathematical model for a desired behavior, according to experiment data or hand drawn curves using evolution algorithm.<br/>
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4.Evaluation of the workablility or robustness of a biological reaction network using pca and entropy.<br/>
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</p>
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<p class="em_text"><p class="intro"> <div class="button_01"> <a href="https://2011.igem.org/Team:USTC-Software/project">Details</a> </div> </p> </p>
<p class="em_text"><p class="intro"> <div class="button_01"> <a href="https://2011.igem.org/Team:USTC-Software/project">Details</a> </div> </p> </p>
          
          

Latest revision as of 12:42, 27 October 2011


Team:USTC-Software - 2011.igem.org

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Lachesis

Team

product

Our team is formed of a group of diligent students coming from various departments of USTC. In the School of Life Sciences, we devoted our perspirations to this project for nearly a year.

Details

Models

product

Biological reaction networks, even small ones, contain a lot of species and reactions and, thus, are hard to build by hand. Our rule-based modeling approach aims at freeing human from such labor.

Details

Human practice

product

We conducted a survey, during the National Science Week, to discover USTC students' opinion on Synthetic Biology.

Details

Project

image

Our project this year is named Lachesis, which consists of the following

1.Automatic generation of biological reaction network simply from biobrick assemblys.
2.Data exchange,Reaction network visualization.
3.Automatic parameter fitting of a mathematical model for a desired behavior, according to experiment data or hand drawn curves using evolution algorithm.
4.Evaluation of the workablility or robustness of a biological reaction network using pca and entropy.

Details


Sponsers


Vistor



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