Team:Osaka/Achievements

From 2011.igem.org

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<h2>Our Achievements</h2>
<h2>Our Achievements</h2>
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<tr><td><i>Successfully complete and submit the iGEM 2011 Judging form.</i></td>
<tr><td><i>Successfully complete and submit the iGEM 2011 Judging form.</i></td>
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<td>Sumbitted!</td></tr>
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<td>Submitted!</td></tr>
<tr><td><i>Create and share a Description of the team's project using the iGEM wiki and the team's parts using the Registry of Standard Biological Parts.</i></td>
<tr><td><i>Create and share a Description of the team's project using the iGEM wiki and the team's parts using the Registry of Standard Biological Parts.</i></td>
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  <li>Acknowedgment of sources and references</li></ul>
  <li>Acknowedgment of sources and references</li></ul>
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<td>Please see <a href="Parts">our Parts page</a> for a list of parts we designed or constructed.</td></tr>
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<td>Please go <a href="http://partsregistry.org/cgi/partsdb/pgroup.cgi?pgroup=iGEM2011&group=Osaka">here</a> for a list of parts we designed or constructed.</td></tr>
<tr><td><i>Submit DNA for at least one new BioBrick Part or Device to the Registry.</i></td>
<tr><td><i>Submit DNA for at least one new BioBrick Part or Device to the Registry.</i></td>
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<td>We submitted 12 new basic parts! (see <a href="http://partsregistry.org/cgi/partsdb/pgroup.cgi?pgroup=iGEM2011&group=Osaka">our Favorite parts</a>)</td></tr>
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<td>We submitted 4 new basic parts! (see our <a href="Parts">parts</a> page)</td></tr>
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<tr><td><i>Demonstrate that at least one new BioBrick Part or Device of your own design and construction works as expected; characterize the operation of your new part/device.</i></td>
<tr><td><i>Demonstrate that at least one new BioBrick Part or Device of your own design and construction works as expected; characterize the operation of your new part/device.</i></td>
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<td rowspan="2"><a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K392038">K392038</a>, <a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K392039">K392039</a>, <a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K392041">K392041</a>; see documentation at Registry or the <a href="https://2010.igem.org/Team:Osaka/Tests">Tests</a> page.</td></tr>
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<td rowspan="2">We demonstrated that <i>Deinococcus radiodurans</i> PprI (<a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K602003">BBa_K602001</a>),PprA (<a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K602003">BBa_K602002</a>), PprM (<a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K602003">BBa_K602003</a>) and RecA (<a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K602003">BBa_K602004</a>) protected transformed <i>E. coli</i> cells from UV-induced lethality to varying extents; see documentation at Registry or the <a href="https://2011.igem.org/Team:Osaka/Tests">Tests</a> page.</td></tr>
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<tr><td><i>Enter this information and other documentation on both the iGEM 2010 wiki and the Registry.</i></td>
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<tr><td><i>Enter this information and other documentation on the part's 'Main Page' section of the Registry.</i></td>
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<tr><th colspan="2" align=left>Additional Requirements for a Gold Medal:
<tr><th colspan="2" align=left>Additional Requirements for a Gold Medal:
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<tr><td><i>Characterize or improve an existing BioBrick Part or Device and enter this information back on the Registry.</i></td>
 
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<td>We modified the cellulase parts <a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K118023">K118023</a> and <a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K118022">K118022</a> into <a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K392006">K392006</a> and <a href="http://partsregistry.org/wiki/index.php?title=Part:BBa_K392007">K392007</a> respectively. The new parts are Silver assembly-compatible and should make multi-domain cellulolytic enzymes easier to design.<br>
 
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We also characterized K118023 (CenA); info can be found at the <a href="https://2010.igem.org/Team:Osaka/Tests">Tests</a> page.</td></tr>
 
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<tr><td><i>Help another iGEM team by, for example, characterizing a part, debugging a construct, or modeling or simulating their system.</i></td>
 
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<td><a href="https://igem.org/Team.cgi?id=378">ECUST Shanghai</a> requested parts from our 2009 project, and we happily obliged by amplifying and sending those parts to them.</td></tr>
 
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<tr><td><i>Develop and document a new technical standard that supports the:<ul>
 
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<li>design of BioBrick Parts or Devices, or</li>
 
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<li>construction of BioBrick Parts or Devices, or</li>
 
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<li>characterization of BioBrick Parts or Devices, or</li>
 
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<li>analysis, modeling, and simulation of BioBrick Parts or Devices, or</li>
 
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<li>sharing BioBrick Parts or Devices, either via physical DNA, or via the Internet</li></ul></i></td>
 
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<td><a href="http://bbf.openwetware.org/RFC.html#BBF_RFC_54:_Abbreviated_BioBrick_Prefix_and_Suffix_for_More_Efficient_Primer_Design">BBF RFC 54</a>, a joint proposal with <a href="https://igem.org/Team.cgi?id=322">Edinburgh</a> team for the elimination of the <i>NotI</i> sites from the BioBrick Prefix and Suffix.</td></tr>
 
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<tr><td><i>Outline and detail a new approach to an issue of Human Practice in synthetic biology as it relates to your project, such as safety, security, ethics, or ownership, sharing, and innovation.</i></td>
<tr><td><i>Outline and detail a new approach to an issue of Human Practice in synthetic biology as it relates to your project, such as safety, security, ethics, or ownership, sharing, and innovation.</i></td>
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<td>Technically we did not come up with a new approach, but did conduct a <a href="https://2010.igem.org/Team:Kyoto/HumanPractice#Introduction">joint Human Practices survey</a> with various other Japanese teams on issues concerning biosafety and bioethics.</td></tr>
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<td>While we did not come up with a new approach, we did conduct a <a href="https://2011.igem.org/Team:Osaka/HumanPractice">joint Human Practices survey</a> with various other Japanese teams on issues concerning biosafety and bioethics.</td></tr>
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In summary, we fulfilled all the requirements to get a Gold Medal. We also<ul>
In summary, we fulfilled all the requirements to get a Gold Medal. We also<ul>
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<li>learned tons about Synthetic Biology,</li>
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<li>learned a lot about Synthetic Biology,</li>
<li>had valuable hands-on experience with molecular biology lab experiments,</li>
<li>had valuable hands-on experience with molecular biology lab experiments,</li>
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<li>picked up some web-authoring skills like HTML, CSS and JavaScript,</li>
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<li>picked up web-authoring skills like HTML, CSS and JavaScript,</li>
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<li>interacted with teams from around the world, and</li>
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<li>tackled and overcame difficulties with project funding,</li>
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<li>had a really great summer!</li></ul>
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<li>interacted with teams from around Japan, Asia and the world, and</li>
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<li>had a great summer!</li></ul>
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Latest revision as of 23:39, 5 October 2011

Our Achievements

Using the iGEM 2011 Judging Form as a guide, we summarize our achievements below.


Requirements for a Bronze Medal:
Register the team, have a great summer, and plan to have fun at the Jamboree. We had a great summer, and are looking forward to having fun at the Jamboree!!
Successfully complete and submit the iGEM 2011 Judging form. Submitted!
Create and share a Description of the team's project using the iGEM wiki and the team's parts using the Registry of Standard Biological Parts. Done!
Plan to present a Poster and Talk at the iGEM Jamboree. Design of the poster is underway; the members are already practicing their presentations.
Enter information detailing at least one new standard BioBrick Part or Device in the Registry of Standard Biological Parts. Including:
  • Primary nucleaic acid sequence
  • Description of function
  • Authorship
  • Safety notes, if relevant.
  • Acknowedgment of sources and references
Please go here for a list of parts we designed or constructed.
Submit DNA for at least one new BioBrick Part or Device to the Registry. We submitted 4 new basic parts! (see our parts page)
Additional Requirements for a Silver Medal:
Demonstrate that at least one new BioBrick Part or Device of your own design and construction works as expected; characterize the operation of your new part/device. We demonstrated that Deinococcus radiodurans PprI (BBa_K602001),PprA (BBa_K602002), PprM (BBa_K602003) and RecA (BBa_K602004) protected transformed E. coli cells from UV-induced lethality to varying extents; see documentation at Registry or the Tests page.
Enter this information and other documentation on the part's 'Main Page' section of the Registry.
Additional Requirements for a Gold Medal:
Outline and detail a new approach to an issue of Human Practice in synthetic biology as it relates to your project, such as safety, security, ethics, or ownership, sharing, and innovation. While we did not come up with a new approach, we did conduct a joint Human Practices survey with various other Japanese teams on issues concerning biosafety and bioethics.

In summary, we fulfilled all the requirements to get a Gold Medal. We also
  • learned a lot about Synthetic Biology,
  • had valuable hands-on experience with molecular biology lab experiments,
  • picked up web-authoring skills like HTML, CSS and JavaScript,
  • tackled and overcame difficulties with project funding,
  • interacted with teams from around Japan, Asia and the world, and
  • had a great summer!