Team:HKU-Hong Kong/Parts

From 2011.igem.org

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By expressing the tetR:H-NS fusion proteins, the tetR part of the proteins wound recognize and specifically bind to the tetR binding region (tetO2). There are two tet-R binding sites as tet-R form a dimer as in the tet repressor- operator system. As the fusion proteins bound to tet-O, it is expected that the H-NS part of the fusion protein would attract and oligomerize with other native H-NS proteins inside the cell.  With the oligomerization of the fusion proteins and native H-NS, the DNA covered by the oligomers is expected to trap the RNA polymerase during transcription, thus gene (GFP) repression is achieved.
By expressing the tetR:H-NS fusion proteins, the tetR part of the proteins wound recognize and specifically bind to the tetR binding region (tetO2). There are two tet-R binding sites as tet-R form a dimer as in the tet repressor- operator system. As the fusion proteins bound to tet-O, it is expected that the H-NS part of the fusion protein would attract and oligomerize with other native H-NS proteins inside the cell.  With the oligomerization of the fusion proteins and native H-NS, the DNA covered by the oligomers is expected to trap the RNA polymerase during transcription, thus gene (GFP) repression is achieved.
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'''Parts that we have created:'''
 
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(The favorite parts are selected based on the potential to be used in our Super silencer repression system)
 
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|style="font-family: georgia, helvetica, arial, sans-serif;font-size:2em;color:#01DF01;" align="left"|[http://partsregistry.org/Part:BBa_K544001 '''BBa_K544001''' ]
 
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|style="font-family: georgia, helvetica, arial, sans-serif;font-size:2em;color:#01DF01;" align="centre"|[http://partsregistry.org/Part:BBa_K544002 '''BBa_K544002''' ]
 
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|style="font-family: georgia, helvetica, arial, sans-serif;font-size:2em;color:#01DF01;" align="right"|[http://partsregistry.org/Part:BBa_K544003'''BBa_K544003''' ]
 
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|style="font-family: georgia, helvetica, arial, sans-serif;font-size:2em;color:#01DF01;" align="left"|[http://partsregistry.org/Part:BBa_K544012'''BBa_K544012''' ]
 
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|style="font-family: georgia, helvetica, arial, sans-serif;font-size:2em;color:#01DF01;" align="centre"|[http://partsregistry.org/Part:BBa_K544011 '''BBa_K544011''' ]
 
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|style="font-family: georgia, helvetica, arial, sans-serif;font-size:2em;color:#01DF01;" align="right"|[http://partsregistry.org/Part:BBa_K544013 '''BBa_K544013''' ]
 
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|style="font-family: georgia, helvetica, arial, sans-serif;font-size:2em;color:#01DF01;" align="left"|[http://partsregistry.org/Part:BBa_K544014 '''BBa_K544014''' ]
 
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|style="font-family: georgia, helvetica, arial, sans-serif;font-size:2em;color:#01DF01;" align="centre"|[http://partsregistry.org/Part:BBa_K544015 '''BBa_K544021''' ]
 
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Revision as of 16:17, 5 October 2011

Sample Data Page
Sample Data Parts.png

By expressing the tetR:H-NS fusion proteins, the tetR part of the proteins wound recognize and specifically bind to the tetR binding region (tetO2). There are two tet-R binding sites as tet-R form a dimer as in the tet repressor- operator system. As the fusion proteins bound to tet-O, it is expected that the H-NS part of the fusion protein would attract and oligomerize with other native H-NS proteins inside the cell. With the oligomerization of the fusion proteins and native H-NS, the DNA covered by the oligomers is expected to trap the RNA polymerase during transcription, thus gene (GFP) repression is achieved.