Team:Tec-Monterrey/projectmodeling

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     <p>&nbsp;</p>
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        <p><a href="https://2011.igem.org/Team:Tec-Monterrey/projectoverview">overview</a></p>
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            <p><a href="https://2011.igem.org/Team:Tec-Monterrey/projectoverview">overview</a></p>
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             <p><a href="https://2011.igem.org/Team:Tec-Monterrey/projectparts">parts</a></p>
             <p><a href="https://2011.igem.org/Team:Tec-Monterrey/projectparts">parts</a></p>
             <p><a href="https://2011.igem.org/Team:Tec-Monterrey/projectmodeling">genetic frame</a></p>
             <p><a href="https://2011.igem.org/Team:Tec-Monterrey/projectmodeling">genetic frame</a></p>
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             <p><a href="https://2011.igem.org/Team:Tec-Monterrey/microcongreso">micro congress</a></p>
             <p><a href="https://2011.igem.org/Team:Tec-Monterrey/microcongreso">micro congress</a></p>
             <p><a href="https://2011.igem.org/Team:Tec-Monterrey/teamfriends">friends</a></p>
             <p><a href="https://2011.igem.org/Team:Tec-Monterrey/teamfriends">friends</a></p>
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        <h2>EXTRAS</h2>
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                  <h2>EXTRAS</h2>
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<p><a href="https://2011.igem.org/Team:Tec-Monterrey/sitemap">site map</a></p>
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            <p><a href="https://2011.igem.org/Team:Tec-Monterrey/sitemap">site map</a></p>
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             <p><a href="https://2011.igem.org/Team:Tec-Monterrey/sponsorsplatinum">sponsors platinum</a></p>
             <p><a href="https://2011.igem.org/Team:Tec-Monterrey/sponsorsplatinum">sponsors platinum</a></p>
             <p><a href="https://2011.igem.org/Team:Tec-Monterrey/sponsorsgold">sponsors gold</a></p>
             <p><a href="https://2011.igem.org/Team:Tec-Monterrey/sponsorsgold">sponsors gold</a></p>
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             <p><a href="https://2011.igem.org/Team:Tec-Monterrey/specialthanks">special thanks</a></p>
             <p><a href="https://2011.igem.org/Team:Tec-Monterrey/specialthanks">special thanks</a></p>
             <p><a href="https://2011.igem.org/Team:Tec-Monterrey/followus">follow us!</a></p>
             <p><a href="https://2011.igem.org/Team:Tec-Monterrey/followus">follow us!</a></p>
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      The first DNA construction our team used, was called “Construct C” this assembly was made in order to obtain data from our AraC-Pbad promoter. Our team worked with parts from British Columbia 09 team. Part BBa_K206000, pBAD,  is an E.coli promoter that is induced by L-arabinose. In the absence of arabinose, the repressor protein AraC, BBa_I13458, binds to the AraI1 operator site of pBAD and the upstream operator site AraO2, blocking transcription [1]. In the presence of arabinose, AraC binds to it and changes its conformation such that it interacts with the AraI1 and AraI2 operator sites, permitting transcription.
 
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K206000 is a variant pBAD promoter with a modified AraI1 site that has been shown both to be responsive to lower concentrations of arabinose and to exhibit a higher maximum expression than the wild type (BBa_I13453), as measured by coupling to a fluorescent reporter by iGEM09 British Columbia Team.
 
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We aslo used as a RBS the Kozak sequence used normally on most constructs, part BBa_B0034, followed by a Green Fluorecent Protein (BBa_b0040), supposed to act as a reporter in order to meassure effectivness of the arabinose promoter. This construct was meassured in e. coli’s strain BW27783, which is unable to metabolize arabinose, (our inductor).
 
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Our results meassured by our team member Fausto Ortiz, were the next ones:
 
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Schlief, R. (2000). Regulation of the L-arabinose operon of Escherichia coli. Trends in Genetics. 16(12):559-565.
 
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Revision as of 03:47, 29 September 2011

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