Team:Penn/project/overview/

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<li id="menu-item-73" class="menu-item menu-item-type-post_type menu-item-object-page current-menu-item page_item page-item-16 current_page_item menu-item-73"><a href="http://benjaminshyong.com/igem2011/project/overview/">Overview</a></li>
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<li id="menu-item-71" class="menu-item menu-item-type-post_type menu-item-object-page menu-item-71"><a href="http://benjaminshyong.com/igem2011/project/optogenetics/">Optogenetics</a></li>
 
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<p>Optogenetics is the coupling of light activation with microbiology techniques. Genetically engineered cells are targeted by light, enabling the control of specific physiological processes in the system. Optogenetics uses an external light source to activate these genetically modified cells.</p>
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<p>Cells can signal to each other through countless mechanisms. Paracrine and endocrine signaling is typically conducted through chemical means, by molecules such as hormones, neurotransmitters, and growth factors. Such signaling is limited by several factors. Diffusion speed limits all forms of cell-cell signaling; a molecule can only travel as fast as the medium it flows in. The species of the cells is also limiting; interkingdom signaling (a term which was only coined within the past decade) only occurs in special instances such as quorum sensing. Finally, scientists are limited in their ability to control cell signaling in vivo. Precise, temporal control of signaling is extremely difficult and has only been recently demonstrated by a technique called optogenetics, where light-activated ion channels are expressed in neurons, allowing neuroscientists to drive or silence action potentials with application of light. With this in mind, we set out to demonstrate a new method of cell signaling: signaling with light. If cells were able to communicate with light, it would overcome the aforementioned limitations because light is transmitted instantaneously, it is nonselective so it can signal between different species, and researchers can precisely and easily mediate this signaling by applying external light. Our goal was to create a line of “Sender Cells” and “Receiver Cells”, where the Sender Cells produce light, and the Receiver Cells receive the signal and produce an instantaneous response.</p>
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<p>This year, our iGEM project wishes to replace this light source with an additional cell population, thus creating a cell to cell optogenetic signaling system. We are using a synthetic biology approach to optogenetics in order to create a light-based cell signaling system. This marriage of synthetic biology and optogenetics would allow for specific control and regulation of engineered synthetic circuits to perform robust functions using less invasive light application techniques.</p>
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<p>The Penn iGEM team has developed “Sender” and “Receiver” Human Embryonic Kidney (HEK) 293T cells which send and receive blue light, respectively. To construct the Sender cell, we developed HEK 293T cells which express Renilla luciferase, a 480nm light emitting protein. The Receiver cell expresses Aequorin (another luciferase) and CatCh, an ion channel gated by 480nm light. Since Aequorin requires Calcium to luminesce, and CatCh is highly permeable to calcium, the opening of CatCh causes the receiver cell to effectively relay the blue light signal by producing light itself. We have characterized this system and have submitted an Aequorin BioBrick to the Registry. We believe that integrating light into the repertoire of cell signaling will eventually prove useful for researchers; a recent review in Science (Chow &#038; Boyden, 2011) has described a growing area of research called Synthetic Physiology, which marries optogenetics and Synthetic Biology in perturbing synthetic and natural gene networks with light.</p>
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<p>Our synthetic system contains two units: the sender cells and the receiver cells. We are using a bioluminescent protein to signal to the receiver cell. We are trying various bioluminescent signals isolated from different sources including marine species and BioBricks. Our receiver cell is engineered to be excited by this signal to perform an output.</p>
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<p></br></p>
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<p>If successful, this optogenetic cell to cell signaling system has enormous biomedical applications such as transdermal dosing of insulin for diabetic patients. This light-induced signaling system could possibly be used to cross biological barriers, such as the gastrointestinal barrier. It would also allow for more mechanisms of vivo signaling.</p>
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<h3>For more information, click the links below:</h3>
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<td><a href="http://benjaminshyong.com/igem2011/project/our-system/"><img src="http://benjaminshyong.com/igem2011/wp-content/uploads/2011/09/our-sys.jpg" alt="" title="our sys" width="206" height="371" class="aligncenter size-full wp-image-335" /></a></td>
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<td><a href="http://benjaminshyong.com/igem2011/project/protocols/"><img src="http://benjaminshyong.com/igem2011/wp-content/uploads/2011/09/protos.jpg" alt="" title="protos" width="206" height="371" class="aligncenter size-full wp-image-336" /></a></td>
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<td><a href="http://benjaminshyong.com/igem2011/project/future-directions/"><img src="http://benjaminshyong.com/igem2011/wp-content/uploads/2011/09/FUTUREW.jpg" alt="" title="FUTUREW" width="206" height="371" class="aligncenter size-full wp-image-337" /></a></td>
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<li class="menu-item menu-item-type-post_type menu-item-object-page menu-item-68"><a href="http://benjaminshyong.com/igem2011/notebook/">Notebook</a></li>
<li class="menu-item menu-item-type-post_type menu-item-object-page menu-item-68"><a href="http://benjaminshyong.com/igem2011/notebook/">Notebook</a></li>
<li class="menu-item menu-item-type-post_type menu-item-object-page menu-item-76"><a href="http://benjaminshyong.com/igem2011/safety-and-society/">Human Practices</a></li>
<li class="menu-item menu-item-type-post_type menu-item-object-page menu-item-76"><a href="http://benjaminshyong.com/igem2011/safety-and-society/">Human Practices</a></li>
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<li class="menu-item menu-item-type-post_type menu-item-object-page menu-item-78"><a href="http://benjaminshyong.com/igem2011/safety/">Safety</a></li>
<li class="menu-item menu-item-type-post_type menu-item-object-page menu-item-63"><a href="http://benjaminshyong.com/igem2011/about-us/">About Us</a></li>
<li class="menu-item menu-item-type-post_type menu-item-object-page menu-item-63"><a href="http://benjaminshyong.com/igem2011/about-us/">About Us</a></li>
<li class="menu-item menu-item-type-custom menu-item-object-custom menu-item-87"><a href="https://2011.igem.org/Main_Page">iGEM</a></li>
<li class="menu-item menu-item-type-custom menu-item-object-custom menu-item-87"><a href="https://2011.igem.org/Main_Page">iGEM</a></li>
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Revision as of 03:26, 29 September 2011

<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd"> Overview | Penn iGEM 2011

Cells can signal to each other through countless mechanisms. Paracrine and endocrine signaling is typically conducted through chemical means, by molecules such as hormones, neurotransmitters, and growth factors. Such signaling is limited by several factors. Diffusion speed limits all forms of cell-cell signaling; a molecule can only travel as fast as the medium it flows in. The species of the cells is also limiting; interkingdom signaling (a term which was only coined within the past decade) only occurs in special instances such as quorum sensing. Finally, scientists are limited in their ability to control cell signaling in vivo. Precise, temporal control of signaling is extremely difficult and has only been recently demonstrated by a technique called optogenetics, where light-activated ion channels are expressed in neurons, allowing neuroscientists to drive or silence action potentials with application of light. With this in mind, we set out to demonstrate a new method of cell signaling: signaling with light. If cells were able to communicate with light, it would overcome the aforementioned limitations because light is transmitted instantaneously, it is nonselective so it can signal between different species, and researchers can precisely and easily mediate this signaling by applying external light. Our goal was to create a line of “Sender Cells” and “Receiver Cells”, where the Sender Cells produce light, and the Receiver Cells receive the signal and produce an instantaneous response.

The Penn iGEM team has developed “Sender” and “Receiver” Human Embryonic Kidney (HEK) 293T cells which send and receive blue light, respectively. To construct the Sender cell, we developed HEK 293T cells which express Renilla luciferase, a 480nm light emitting protein. The Receiver cell expresses Aequorin (another luciferase) and CatCh, an ion channel gated by 480nm light. Since Aequorin requires Calcium to luminesce, and CatCh is highly permeable to calcium, the opening of CatCh causes the receiver cell to effectively relay the blue light signal by producing light itself. We have characterized this system and have submitted an Aequorin BioBrick to the Registry. We believe that integrating light into the repertoire of cell signaling will eventually prove useful for researchers; a recent review in Science (Chow & Boyden, 2011) has described a growing area of research called Synthetic Physiology, which marries optogenetics and Synthetic Biology in perturbing synthetic and natural gene networks with light.


For more information, click the links below: