Team:Groningen/project characterisation promoters pbad

From 2011.igem.org

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=pBAD/AraC promoter=
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Below you will find four figures representing the results of our measurements.
Below you will find four figures representing the results of our measurements.
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[[File:pbad1.png|thumb|center|500px|'''Experiment 1a.''' Cells carrying a pSB1C3 plasmid with pBAD/AraC-GFP-DT construct, induced at time=0h.]]
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<gallery>
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[[File:pbad2.png|thumb|center|500px|'''Experiment 1b.''' Wild type cells, induced at time=0h.]]
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File:pbad1.png|'''Figure 1a.''' Cells carrying a pSB1C3 plasmid with [http://partsregistry.org/Part:BBa_K607036 BBa_K607036], induced at time=0h.
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[[File:pbad3.png|thumb|center|500px|'''Experiment 2a.''' Cells carrying a pSB1C3 plasmid with pBAD/AraC-GFP-DT construct, induced at time=0h.]]
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File:pbad2.png|'''Figure 1b.''' Wild type cells, induced at time=0h.
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[[File:pbad4.png|thumb|center|500px|'''Experiment 2b.''' Wild type cells, induced at time=0h.]]
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File:pbad3.png|'''Figure 2a.''' Cells carrying a pSB1C3 plasmid with [http://partsregistry.org/Part:BBa_K607036 BBa_K607036], induced at time=0h.
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File:pbad4.png|'''Figure 2b.''' Wild type cells, induced at time=0h.
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</gallery>
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The pBAD/AraC promoter exhibits a dynamic response in a range of arabinose concentrations. Both the speed of activation and its strength are higher with higher concentrations of the inducing molecule. Because of that this promoter is a good choice for constructs producing transcription factors that induce other measured promoters. It is also a good choice for a promoter used in a jammer construct, as its response is predictable and can be very strong.
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Latest revision as of 09:56, 21 September 2011


pBAD/AraC promoter

In our system and measurements we have been using the pBAD/AraC promoter ([http://partsregistry.org/Part:BBa_I0500 BBa_I0500]). This promoter is functioning in our circuit as a jammer for the LasR autoinducing loop. It is also used to induce the cI autoinducing loops during the measurements. That is why, in our opinion, characterizing this promoter in a way that would show us the activity rate not only depending on concentration of arabinose, but also in a dynamic way - over time - is crucial. The measurements were done as described in protocol.

Below you will find four figures representing the results of our measurements.

The pBAD/AraC promoter exhibits a dynamic response in a range of arabinose concentrations. Both the speed of activation and its strength are higher with higher concentrations of the inducing molecule. Because of that this promoter is a good choice for constructs producing transcription factors that induce other measured promoters. It is also a good choice for a promoter used in a jammer construct, as its response is predictable and can be very strong.