Team:Kyoto/Notebook

From 2011.igem.org

(Difference between revisions)
(Week3: Monday 15th - Sunday 21th August)
(Week3: Monday 15th - Sunday 21th August)
Line 103: Line 103:
Right primer: actagtacacacaagctgtgaatcactc<br/>
Right primer: actagtacacacaagctgtgaatcactc<br/>
annealing temperature was 55 degrees.<br/>
annealing temperature was 55 degrees.<br/>
-
~~photo~~<br/>
+
[[File:Kyoto-Gel1.jpg]]<br/>
lane 1,2 &7,8: DNA ladder(λDNA digested Hindlll,100bp), lane 3,4: glnG1,glnG2, lane 5,6: glnL1,glnL2<br/>
lane 1,2 &7,8: DNA ladder(λDNA digested Hindlll,100bp), lane 3,4: glnG1,glnG2, lane 5,6: glnL1,glnL2<br/>

Revision as of 10:00, 20 September 2011

Contents

Lab Note

Week1: Monday 1st - Sunday 7th August

Monday
行った実験名:

使った試薬名、容量:

用いた機械:

行った人:


Tuesday

Wednesday

Thursday

Friday

Saturday

Sunday

Week2: Monday 8th - Sunday 14th August

Monday

Tuesday

Wednesday

Thursday

Friday

Saturday

Sunday

Week3: Monday 15th - Sunday 21th August

Monday

Tuesday

Wednesday

Thursday
Nutritional Signal(Sugiura,Shimosaka & Okumura)
PCR Amplification of glnL and glnG from gDNA of E.coli

--Primers--
glnL
Left primer: tctagaggagactgctttatggcaac
Right primer: actagtaggaactatcgtcatcgactac
glnG
Left primer: tctagaggtgacgtttatgcaacga
Right primer: actagtacacacaagctgtgaatcactc
annealing temperature was 55 degrees.
File:Kyoto-Gel1.jpg
lane 1,2 &7,8: DNA ladder(λDNA digested Hindlll,100bp), lane 3,4: glnG1,glnG2, lane 5,6: glnL1,glnL2

After purification, the concentration of DNA are
glnG1: 127.8ng/ul
glnG2: 118.1ng/ul
glnL1: 137.4ng/ul
glnL2: 124.2ng/ul

Friday
Nutritional Signal(Shimosaka)
Restriction of glnG1 and glnG2
Cut them with Xbal and Spel for 2 hours at 37 degrees.
Then, gel extraction of digested.

Saturday

Sunday

Week4: Monday 22th - Sunday 28th August

Monday

Tuesday

Wednesday

Thursday
Luminescence(Kusaba, Terada, Hara):ハエの走行性実験① ♂、紫外線×2回、緑×2回 ♀、紫外線×2回、緑×2回

Friday
Luminescence(Kusaba):ハエの走行性実験① ♂、赤外線×2回 ♀、赤外線×2回

Nutritional Signal(Hashiya): Transformation of bellow parts.
1,4-17M:BBa_K325909(lux operon)
2,1-12M:BBa_E0240
3,2-17F:BBa_120260(low copy vector)


Saturday
Luminescence(Kusaba):ハエの走行性実験① ♂、赤×2回、青×2回 ♀、赤×2回、青×2回

Sunday

Week5: Monday 29th August - Sunday 4th September

Monday

Tuesday

Wednesday

Thursday

Friday

Saturday

Sunday

Week6: Monday 5th September - Sunday 11th September

Monday

Tuesday
Luminescence(Kusaba, Hara):ハエの走行性実験②(②は改良版) ♂、緑×2回 ♀、青×1回

Wednesday
Luminescence(Hara):ハエの走行性実験② ♂、青×2回 ♀、緑×2回、青×1回

Thursday
Luminescence(Hara):ハエの走行性実験② ♂、紫外線×3回 ♀、紫外線×3回

Friday

Saturday
Luminescence(Kusaba, Hara):ハエの走行性実験② ♂、青×2回、赤×2回 ♀、青×2回、赤×2回 

Sunday
Luminescence(Kusaba, Hara):ハエの走行性実験② ♂、紫外線×2回、

Week7: Monday 12th September - Sunday 18th September

Monday

Luminescence:大腸菌の形質転換(Hashiya) ハエの走行性実験②(Kusaba, Hara)

Tuesday

Luminescence:大腸菌はじめて光る。しかし光量は少ない。

Wednesday

Thursday

Friday

Saturday

Sunday

Week8: Monday 19th September - Sunday 25th September

Monday

Tuesday

Wednesday

Thursday

Friday

Saturday

Sunday

Week9: Monday 26th September - Sunday 2nd October

Monday

Tuesday

Wednesday

Thursday

Friday

Saturday

Sunday

Protocol

Medium for drosophila

[http://www.biol.se.tmu.ac.jp/fly/www/standard-medium.html Medium for drosophila]
Materials Methods
  • water : 500mL
  • dry yeast : 20g
  • corn flour : 45g
  • glucose : 50g
  • agarose : 3.5~5g
  • propionic acid : 1.5mL
  • 10% p-hydroxybenzoate in 70% Eternol : 5g
  1. Stir dry yeast and agarose with about two-thirds of water. Then, autoclave it.
  2. Stir corn flour and glucose with the remaining water.
  3. Stir 1 and 2, then autoclave it again.
  4. after autoclave, add propionic acid and 10% p-hydroxybenzoate in 70% Eternol into it.■