Team:USTC-Software

From 2011.igem.org


Team:USTC-Software - 2011.igem.org

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Lachesis

Team

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Our team is formed of a group of diligent students coming from various departments of USTC. In the School of Life Sciences, we devoted our perspirations to this project for nearly a year.

Models

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Biological reaction networks, even small ones, contain a lot of species and reactions and, thus, are hard to build by hand. Our rule-based modeling approach aims at freeing human from such labor.

Human practice

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We conducted a survey, during the National Science Week, to discover USTC students' opinion on Synthetic Biology.

Project

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Our project this year is named Lachesis, which consists of the following

1.Automatic generation of biological reaction network simply from biobrick assemblys.
2.Data exchange,Reaction network visualization.
3.Automatic parameter fitting of a mathematical model for a desired behavior, according to experiment data or hand drawn curves using evolution algorithm.
4.Evaluation of the workablility or robustness of a biological reaction network using pca and entropy.


Sponsers



Vistor