Team:Tec-Monterrey/teamha

From 2011.igem.org

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Since the beginning, our project was aimed directly towards helping society. Our main goal was to update a process for a dying industry in Mexico. Sugar cane, once an agricultural product of international value, is now left to wither due to high production costs, low demand and the rise of alternative sweeteners. Millions of Mexican families depend on the sugar cane factories located in their villages, not only their income is in peril but their very way of life.
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We hope to address an old problem, but growing problem. Something forgotten by the rise of new difficulties, something that we think deserves all of our time and effort.  From sugar cane sucrose can extracted which then can be transformed into fructose. With the immobilization method we use, the number of steps are reduced and the whole process yield is higher. If this process is improved, a new demand for sugar cane arises.<br>
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One of our human practice achievements is the “Augmented Reality Biobrick Software” in which the technology, science and a little bit of fun are combined. Our software is useful tool both for iGEMers and non-iGEMers as an interactive option to teach and learn more about the synthetic biology. During the iGEM competition, the iGEMers can use this software to build up their genetic constructs with a user-friendly-interphase that can store 3D symbolic models of constructions. As a teaching tool it can be used as representations of biobricks in a more immersive way, being able not only to control the buildup of genetic constructions but also to learn about the interactions between prefixes and suffixes.
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iGEM encourages teams around the world to promote synthetic biology in their local communities. In order to fulfill this task, we organized a series of activities during our summer and the beginning of our semester.  
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If you want to build your biobricks in a new and entertaining way you only need a webcam and to follow these simple instructions!
 
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<a href="http://dl.dropbox.com/u/23640080/Biotecnologia.exe">
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The first step we took, was writing a series of articles discussing the myths and facts of biotechnology. They were published in our school’s journalism webpage. Thanks to the ene.pé group (New Press), we had a place to review biofuels, genetic modified organisms and stem cells. In the Mexican society, any modification in the natural structure of an organism is seen as taboo, hence, what we hoped to accomplish was to familiarize people with such terms by giving them clear and concise answers about biotechnology.
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(The ene.pé websites is undergoing a few server changes, but our articles will be available soon.)
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<a href="https://static.igem.org/mediawiki/2011/1/1e/Printbiobricks.pdf">
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We also worked along the technology department in order to develop an augmented reality software. Using physical marks and a webcam we are able to create real-time interaction program that allows you to assemble biobricks. This can be used to build genetic constructs with a user-friendly-interphase that can store 3D symbolic models of constructions. As a teaching tool it can be used as representations of biobricks in a more immersive way, being able not only to control the buildup of genetic constructions but also to learn about the interactions between prefixes and suffixes. <br>
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This software, along with the instructions of how to use it, is available here.(link**)
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1.- Download and install ".exe" file (Biotecnologia.exe)
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2.- Download and print ".pdf" file in black and white (save ink!)
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Our main event in took place during the summer, we hosted a reunion for all the Mexican teams in our campus. We held a series of conferences in order to discus synthetic and molecular biology, not only the research projects or the technological aspects of the new advances and discoveries but also, the ethical impact our field has in people’s daily lives. <br>
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We also saved a special part in our congress to discuss and review the difficulties of importing genetic material into Mexico. Not only us but our fellow teams had problems receiving our kits, customs in our country gave us a hard time but with the help of Manuel Tiscareño, we were able to understand the bureaucratic process behind the entrance of biological material. <br>
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We were very glad to receive our kit but also we were very happy that we could help our fellow teams along the way.
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If you would like to read the full note, click here. link***<br>
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3.- Cut the printed figures, they represent the parts for the construct
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4.- Once "Biotecnologia.exe" is running, place the figures in webcam view, you'll be able to see them on screen.
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5.- Find the image representing a Plasmid backbone.
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An introductory workshop to synthetic biology was offered to freshmen students in our faculty. We worked with a DNA extraction kit, a common task in the lab but since all the labs safety rules were followed strictly, students received a clear idea of what it is to work in a research project. <br>
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6.- Next, select another part to add, whether it is a promoter, a ribosome binding site, a coding sequence, or even a terminator. In order to do so, you must put a part next to the plasmid backbone image and wait for a few seconds to begin assembling.  
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7.- Place the parts in the order you want and capture your construct in a ".jpg" file for further reviewing.
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If you need to delete a part click on it and then delete.  
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If you want to save the image click on save and you will have your construct ready.
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If you have any questions, send us an email!
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Augmented Reality creates a mix between reality and a 3D computer program, by taking information from the physical world, a computer or any other electronic device is able to complement what you are seeing or hearing with multimedia information. Some programs let you interect with them, other show small animation sequences but all of them exploit the boundaries between reality and CG graphics.  
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At last but not least, we created an animation video in order to explain our process. We hoped to represent in a simple yet beautiful way how the enzyme immobilization process takes place. This video was made with Maya 2012, under the sponsorship granted by Autodesk to all iGEM teams. Anita Sifuentes, the team’s animation student, knows that designing with educational purposes in mind is a difficult task, It is not the easiest of jobs, but it is the one with the most impact and, for her, it’s also the most rewarding.
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We thank a lot Engineer Pablo Guillermo Ramírez Flores and Engineer Héctor Eduardo Ramírez from the "Center for Knowledge Systems" (Centro de Sistemas de Conocimientos) for helping us create this program. We think your world and ours have so many differences that can be joined to create magic!
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You can watch the video in our Main tab or by clicking here. link*** <br>
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Recently a note related to our video went up in our Autodesk blog, which can be read here. link***<br>
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Revision as of 22:00, 18 October 2011

wiki

iGEM

 

 



Since the beginning, our project was aimed directly towards helping society. Our main goal was to update a process for a dying industry in Mexico. Sugar cane, once an agricultural product of international value, is now left to wither due to high production costs, low demand and the rise of alternative sweeteners. Millions of Mexican families depend on the sugar cane factories located in their villages, not only their income is in peril but their very way of life.
We hope to address an old problem, but growing problem. Something forgotten by the rise of new difficulties, something that we think deserves all of our time and effort. From sugar cane sucrose can extracted which then can be transformed into fructose. With the immobilization method we use, the number of steps are reduced and the whole process yield is higher. If this process is improved, a new demand for sugar cane arises.
iGEM encourages teams around the world to promote synthetic biology in their local communities. In order to fulfill this task, we organized a series of activities during our summer and the beginning of our semester.


The first step we took, was writing a series of articles discussing the myths and facts of biotechnology. They were published in our school’s journalism webpage. Thanks to the ene.pé group (New Press), we had a place to review biofuels, genetic modified organisms and stem cells. In the Mexican society, any modification in the natural structure of an organism is seen as taboo, hence, what we hoped to accomplish was to familiarize people with such terms by giving them clear and concise answers about biotechnology.
(The ene.pé websites is undergoing a few server changes, but our articles will be available soon.)


We also worked along the technology department in order to develop an augmented reality software. Using physical marks and a webcam we are able to create real-time interaction program that allows you to assemble biobricks. This can be used to build genetic constructs with a user-friendly-interphase that can store 3D symbolic models of constructions. As a teaching tool it can be used as representations of biobricks in a more immersive way, being able not only to control the buildup of genetic constructions but also to learn about the interactions between prefixes and suffixes.
This software, along with the instructions of how to use it, is available here.(link**)


Our main event in took place during the summer, we hosted a reunion for all the Mexican teams in our campus. We held a series of conferences in order to discus synthetic and molecular biology, not only the research projects or the technological aspects of the new advances and discoveries but also, the ethical impact our field has in people’s daily lives.
We also saved a special part in our congress to discuss and review the difficulties of importing genetic material into Mexico. Not only us but our fellow teams had problems receiving our kits, customs in our country gave us a hard time but with the help of Manuel Tiscareño, we were able to understand the bureaucratic process behind the entrance of biological material.
We were very glad to receive our kit but also we were very happy that we could help our fellow teams along the way. If you would like to read the full note, click here. link***


An introductory workshop to synthetic biology was offered to freshmen students in our faculty. We worked with a DNA extraction kit, a common task in the lab but since all the labs safety rules were followed strictly, students received a clear idea of what it is to work in a research project.


At last but not least, we created an animation video in order to explain our process. We hoped to represent in a simple yet beautiful way how the enzyme immobilization process takes place. This video was made with Maya 2012, under the sponsorship granted by Autodesk to all iGEM teams. Anita Sifuentes, the team’s animation student, knows that designing with educational purposes in mind is a difficult task, It is not the easiest of jobs, but it is the one with the most impact and, for her, it’s also the most rewarding.
You can watch the video in our Main tab or by clicking here. link***
Recently a note related to our video went up in our Autodesk blog, which can be read here. link***