Team:METU-BIN Ankara/Project

From 2011.igem.org

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<div class="m4b margin"><h6>See our software, it's online!</h6>
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<a href="#" target="_blank"><img src="http://www.metu.edu.tr/~e172018/images/metu-bin/m4b.png" /></a>M4B: Mining for BioBricks. It's a miner that goes over all the parts and finds the possible devices for you! <a href="#" target="_blank">Click on here or the logo!</a>
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<a href="http://dayhoff.ii.metu.edu.tr:8080/m4b/" target="_blank"><img src="http://www.metu.edu.tr/~e172018/images/metu-bin/m4b.png" /></a>M4B: Mining for BioBricks. It's a miner that goes over all the parts and finds the possible devices for you! <a href="http://dayhoff.ii.metu.edu.tr:8080/m4b/" target="_blank">Click on here</a> or the logo!
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Revision as of 21:53, 15 September 2011

METU-BIN iGEM Software TeamProject: Mining for BioBricks

Project

M4B: Mining for BioBricks

Main goal of our 2011 project is to provide a web based tool that helps synthetic biologists at the pre-experimental step to design their genetic constructs according to their input and output parameters.

  • A network of all bioparts in 2011 distribution will be generated, which describes the functional relations between the subatomic bioparts.
  • A search algorithm will be developed to reveal all possible device combinations for the user defined input and output within bioparts of 2011 distribution.
  • Visualization tools will be applied for graphical representation of the results.
  • A web-based user interface will be provided for the developed software.

Introduction

Design

Algorithm

Database Standardization

Scoring

Results

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