Team:IIT Madras/Dry lab/Tools/sdm-pd

From 2011.igem.org

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<script>
<script>
function test(){
function test(){
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alert();
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var n= document.forms["main_form"]["number"].value;
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if(n>=20) alert("At the maximum, only a 100 mutations are allowed by the algorithm.");
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else{
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var i=0;
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document.getElementById("inputs").innerHTML="";
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for(i=0; i<n; i++){
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document.getElementById("inputs").innerHTML+="Mutation "+(i+1)+": Position <input type='text' name=position" +i+ "/> Required Mutation: <input type='text' name=mutation" +i+ "/><br/>" ;
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}
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}
}
}
</script>
</script>
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<h1>Primer designing tool for site directed mutagenesis</h1>
<h1>Primer designing tool for site directed mutagenesis</h1>
<br/><br/>
<br/><br/>
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<form name="main_form" action="http://shaastra.org/public_html/2011/biodocks/igem_SDM_primers.pl" method="GET">
<p><b>Step 1.</b>Please enter raw, or FASTA formatted sequence</p> <br/>
<p><b>Step 1.</b>Please enter raw, or FASTA formatted sequence</p> <br/>
<textarea cols="20" rows="5" style="width:450px;" name="seq"></textarea>
<textarea cols="20" rows="5" style="width:450px;" name="seq"></textarea>
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<p><b>Step 2.</b>Enter the number mutation of mutuations required : <input type="text" onFocusOut="test();" name="number"/>
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<p><b>Step 2. </b>Enter the number mutation of mutuations required : <input type="text" onblur="test()" name="number"/>
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Mutation Code : <input type="text" size=30 name="mutution" /> (optional)</p>
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<div id="inputs"></div>
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<table><tr><td></td><td><i>Min</i></td><td><i>Max</i></td></tr>
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<tr><td>Melting temperature in C</td><td><input type="text" name="min_temp"/></td><td><input type="text" name="max_temp"/></td></tr>
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<tr><td>GC content</td><td><input type="text" name="min_gc"/></td><td><input type="text" name="max_gc"/></td></tr>
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<tr><td>lenght</td><td><input type="text" name="min_lenght"/></td><td><input type="text" name="max_lenght"/></td></tr>
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</table>
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<input type="submit" />
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</p>
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</form>
</div>
</div>

Latest revision as of 01:31, 6 October 2011

bar iGEM 2011 - Home Page Indian Institute of Technology - Madras

Primer designing tool for site directed mutagenesis



Step 1.Please enter raw, or FASTA formatted sequence


Step 2. Enter the number mutation of mutuations required :

MinMax
Melting temperature in C
GC content
lenght