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Team:BU Wellesley Software/OptimusPrimer
From 2011.igem.org
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| - | + | <img style="float:right; width:280px; height:200px" src="http://cs.wellesley.edu/~hcilab/iGEM_wiki/images/System/SurfacePrimer.jpg"/> | |
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| - | + | In the surface application, alignment results are generated using a .jar and BLAST results are generated using the NCBI BLAST software. Both are accessed from the command line, with BLAST results being written to file and parsed out for display and alignment results being pulled from common output for further calculation for hetero-dimer and self-dimer tests. The surface application provides a streamlined, intuitive interface for learning and collaborative design. | |
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| - | + | The surface application and the desktop GUI use the same algorithms. | |
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Revision as of 17:39, 10 September 2011
Computational Team
In the surface application, alignment results are generated using a .jar and BLAST results are generated using the NCBI BLAST software. Both are accessed from the command line, with BLAST results being written to file and parsed out for display and alignment results being pulled from common output for further calculation for hetero-dimer and self-dimer tests. The surface application provides a streamlined, intuitive interface for learning and collaborative design.
The surface application and the desktop GUI use the same algorithms.
Ethical User Study practices:
Aliquam in felis sit amet eros pharetra volutpat.Overview: Optimus Primer
Hypothesis Forming
Overview of this stage of the cycle. What are we trying to accomplish, what tools are needed, how are we going to approach it, what do we want out of it?
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Demo Video
Wetlab
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Results:
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